Nick Guenther

> 1. I'm not sure that knowing one flavor of Markdown necessarily helps someone to use MyST Markdown. If, say, someone is coming from, e.g. [GitHub-flavored Markdown](https://github.github.com/gfm/) they'll still need...

related to #1526

And yeah thanks a lot for reporting this! I think these issues are positive pressure on us to be more standards-compliant. :white_flower:

Yes very much. Good call.

That's just for one call into ANTs... here's the others: https://github.com/spinalcordtoolbox/spinalcordtoolbox/blob/9e642d0531d04ff59dd545351670229e3bb4075f/spinalcordtoolbox/scripts/sct_apply_transfo.py#L219-L224 https://github.com/spinalcordtoolbox/spinalcordtoolbox/blob/9e642d0531d04ff59dd545351670229e3bb4075f/spinalcordtoolbox/registration/register.py#L172-L192 https://github.com/spinalcordtoolbox/spinalcordtoolbox/blob/9e642d0531d04ff59dd545351670229e3bb4075f/spinalcordtoolbox/registration/register.py#L233-L253 https://github.com/spinalcordtoolbox/spinalcordtoolbox/blob/9e642d0531d04ff59dd545351670229e3bb4075f/spinalcordtoolbox/registration/register.py#L1054-L1072 https://github.com/spinalcordtoolbox/spinalcordtoolbox/blob/9e642d0531d04ff59dd545351670229e3bb4075f/spinalcordtoolbox/scripts/sct_concat_transfo.py#L99-L100 https://github.com/spinalcordtoolbox/spinalcordtoolbox/blob/9e642d0531d04ff59dd545351670229e3bb4075f/spinalcordtoolbox/scripts/sct_detect_pmj.py#L199-L201 https://github.com/spinalcordtoolbox/spinalcordtoolbox/blob/9e642d0531d04ff59dd545351670229e3bb4075f/spinalcordtoolbox/scripts/sct_register_to_template.py#L568-L569 https://github.com/spinalcordtoolbox/spinalcordtoolbox/blob/9e642d0531d04ff59dd545351670229e3bb4075f/spinalcordtoolbox/scripts/sct_register_to_template.py#L693-L694 maybe https://github.com/spinalcordtoolbox/spinalcordtoolbox/blob/9e642d0531d04ff59dd545351670229e3bb4075f/spinalcordtoolbox/scripts/sct_register_to_template.py#L568-L569 maybe https://github.com/spinalcordtoolbox/spinalcordtoolbox/blob/9e642d0531d04ff59dd545351670229e3bb4075f/spinalcordtoolbox/scripts/sct_register_to_template.py#L610-L611 https://github.com/spinalcordtoolbox/spinalcordtoolbox/blob/9e642d0531d04ff59dd545351670229e3bb4075f/spinalcordtoolbox/scripts/sct_register_to_template.py#L704-L705 https://github.com/spinalcordtoolbox/spinalcordtoolbox/blob/9e642d0531d04ff59dd545351670229e3bb4075f/spinalcordtoolbox/scripts/sct_register_to_template.py#L711-L712

Guessing, probably `-itk-threads` works fine for all of these. `moco` is the odd one out here, due to a patch I put in :/ But also, does it actually speed...

I wonder what's the status on this. `pip` does most of the work in `./install_sct` now. We still need to use `sct_download_data` to get the `bin/` folder and the pre-trained...

Just a note on some research I stumbled into: Right now `pip install .` does not install the package, and `python setup.py build` will make a broken package, because all...

They're on it: https://github.com/pytorch/pytorch/issues/26340

Ah but https://github.com/python-poetry/poetry/issues/1391#issuecomment-654291218 > Why the hell isn't a big project like PyTorch published on a PEP-conform index? I opened an issue (pytorch/pytorch#26340) some time ago -- so far without...