Konstantin Riege

Results 15 comments of Konstantin Riege

> If you are compressing files, I would **really** recommend [bgzip](http://www.htslib.org/doc/bgzip.html), which also should be a drop-in replacement for gzip and is available via the Debian/Ubuntu package manager. It can...

> I have pushed a [commit](https://github.com/mxmlnkn/indexed_bzip2/commit/4fcfa86e63ebc2caa46175a399c7f6f6a8ddf41a) that should make your use case of using stdin input to create an index work to develop. You can try it out with: >...

As an interim solution on Linux, you can switch to a Conda environment in which R is installed via the Python interpreter selection dropdown menu. This will activate the Conda...

I found a hacky way to at least get stdout. when you know the output file paths and assuming `--zip-out true` option was used on paired-end data, then in a...

I did not test if this might be caused by not using gcc 11.4 when building the conda package, although specified in `conda_build_config.yaml`. however, I solved this issue by building...