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Request: Allow size dimensions on the umap plot

Open arnicas opened this issue 2 years ago • 7 comments

Another potential for simple command line, or yaml: what should the dimensions of the umap plot display be?

arnicas avatar Sep 15 '22 14:09 arnicas

Bokeh only allows selection on a 2d plane, so I think we're constrained by that.

I've also tried doing selections in 3d and found them to be terribly unintuitive.

koaning avatar Sep 15 '22 14:09 koaning

I meant size in pixels for the plot layout itself in the html window. I want it bigger :)

arnicas avatar Sep 15 '22 14:09 arnicas

Ah like that! That should be easily configurable, sure.

koaning avatar Sep 15 '22 14:09 koaning

One thing that's in the background: I haven't decided if I want to keep using the Bokeh layout or if I want to roll my own by integrating it with my a FastAPI server. I'll have a lot more control over the visual in the latter scenario, but it would also involve a lot more work and it might go beyond the appetite of my employer in the short term.

I agree that this should be configurable, but I may want to delay the config system until I've decided if I'm using Bokeh or something custom.

koaning avatar Sep 15 '22 15:09 koaning

@arnicas : If you need to enlarge the UMAP fig, you could it manually by fixing the plot_width and plot_height in code

remydecoupes avatar Jan 30 '23 15:01 remydecoupes

Sure - I had already hacked it a lot for personal use. I was just registering my issues as requests.

arnicas avatar Jan 30 '23 15:01 arnicas

It's still something that's in the back of my mind by the way 🙂 but doing this may require a config system because there are many other things people may want to configure. Things like size of the dot in the chart, etc.

koaning avatar Jan 30 '23 17:01 koaning