thesis

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How did you perform this? "PCA of mean GO term codon usage" I was reading your thesis saw in this chapter ``` Implications of codon–anticodon interaction on the regulation of...

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How are you defining gene/transcript expression?

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In [rna-seq.tex](https://github.com/klmr/thesis/blob/master/rna-seq.tex) you have excellent discussion of various aspects of expression quantification. I think there are some missing pieces: - Given that you state you are interested in transcript quantification,...

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