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Make scplot compatible with pegasusio

Open yihming opened this issue 4 years ago • 0 comments

  • In violin, heatmap, scatter, dotplot, scatter_matrix, embedding, variable_feature_plot, volcano, composition_plot, make adata be of either AnnData or PegasusIO MultimodalData type. And in code, if adata is not AnnData, convert it to AnnData.

  • Add pegasusio to dependencies.

  • Modify variable_feature_plot to be able to plot for Pegasus Seurat flavor highly variable genes.

yihming avatar Jun 12 '20 05:06 yihming