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models to benchmark

Open kjappelbaum opened this issue 3 years ago • 2 comments

  • modnet
  • https://arxiv.org/abs/2209.11807 and models mentioned in there
  • moftransformer

kjappelbaum avatar Feb 08 '23 10:02 kjappelbaum

@kjappelbaum I was trying to think of the best way to benchmark moftransformer. It's pretrained on some tasks, is it a requirement to ensure that pretraining was not performed on leadboard test MOFs? Even in the case where leadboard tasks are very different to the pretraining tasks?

FMcil avatar Mar 22 '23 14:03 FMcil

it is on my ToDo's #417

The reason I didn't do it so far is (indeed) that I think one needs to be a bit more careful with hyperparameter optimization and pertaining. At least the hyperparameter optimization should happen within the cross-validation loop of the benchmark. De-duplicating the pre-training dataset would be nice, but it is probably not as relevant as being careful with the hyperopt

kjappelbaum avatar Mar 25 '23 10:03 kjappelbaum