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Ouija with precomputed pseudotime

Open skannan4 opened this issue 4 years ago • 0 comments

Apologies in advance as I realise this is partially a clone of https://github.com/kieranrcampbell/ouija/issues/5. But I'm looking for several of the functionalities of ouija, but with a precomputed pseudotime from another pseudotime method. In particular, the plot_switch_times (with the error bounds) as well as the gene regulation and metastable state testing would be interesting. But I haven't been able to find similar functionality in switchde. Is there a good way to do this using either package?

skannan4 avatar Sep 29 '20 16:09 skannan4