Genomic-ULMFiT

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Getting an NameError: name 'BaseTokenizer' is not defined!

7

I can't running your script because the utils is giving this error in jupyter notebook! Any tip for make it work? Thank you ``` NameError Traceback (most recent call last)...

schlogl2017

It would kind of cool use your code, but...so many issues!

1

The code it is hard to read! And have problems with version issues! You even make a requirement list of the programs versions! Paulo.

schlogl2017

Hi, I got to know about your model thru fast.ai forum I am interested in using your genomic model for Kaggle competition: https://www.kaggle.com/c/stanford-covid-vaccine/overview As the competition only last 3 weeks,...

sn88798

Hello, thanks a lot for the great repo! I'm trying to train a language model with different k-mers with stride=1. As you already discussed, we should expect the loss for...

jsephine

State of the art?

2

Hi! Thanks for your great work. I was wondering if this pre-trained network is state of the art or close? I am interested in doing some pre-training with biological sequences,...

lucidrains

transcripotion -> transcription

schaber

NameError: name '_get_genomic_processor' is not defined

1

Function named '_get_genomic_processor' seems to be undefined in 'E. coli 1 Naive Model.ipynb'  NameError: name '_get_genomic_processor' is not defined

nitinnairk