How to identify convergent sites by csubst?

[xinghua1001]

Hi,

Thank you for proposing the very smart new metric OmegaC and developing csubst. I'm not sure whether I understand it correctly, OmegaC is calculated by gene. After running csubst, we can know which gene is selected by filter the OmegaC. I'm particularly interested in the highly repetitive adaptive convergence. However, the question is that can we identify which amino acid site is the convergent sites underlying the phenotype by csubst, because I could not find this in the csubst results.

Thanks!

XL