Kevin Rue-Albrecht

Thanks for the context. I should have guessed! Anyway, yes to continuing on Slack and revisiting our documentation for developers. I think it's a bit out of date now, but...

> @kevinrue Anyway, yes to continuing on Slack and revisiting our documentation for developers. I think it's a bit out of date now, but I've started a new book which...

(Not forgetting about you.. Just really swamped for the next few weeks.. Actually, iSEE-related!)

Having a similar issue with the following: ``` > obj

Finally got around to checking this. Looks nice. What's the story about `customTags`? This PR seems to add in in the man page, but without adding it to the function...

Just my two cents that running a course today, we ran into the same old issue of 'read10xVisiumI()` adding `outs/` to file paths which doesn't play well with the way...

> Hi, searching and installing cellsnp-lite work well on my Linux HPC. Can you try installing again? or you may report the issue to bioconda. > > FYI, my conda...

Shall I open another issue for my related issue? only asking as the original poster seems unresponsive here, so there isn't much for me to track. On the other hand,...

I'm about to try that but in that case I'll point out that the tutorial https://satijalab.org/seurat/articles/seurat5_integration#perform-streamlined-one-line-integrative-analysis is a bit confusing (to me) then. It runs ``` obj

I can confirm that I got integration usign SCT to work just now. It's too long (a month) since my original attempt and I haven't kept the whole notebook, so...