Kelli Johnson

update CRAN

2

{bblme} is being archived on 2022-05-22, which the {ss3sim} CRAN version depends on. Thus, we will need to push the latest version of {ss3sim} to CRAN before then so we...

When reading through the Introduction vignette I noticed that some of the terminology that is used is inconsistent with what will be provided in the data dictionary effort. For example,...

calculate relative error (RE) automatically before saving results

2

I feel like I waste a lot of time and code calculating the relative error of the EM compared to the OM. For example, I almost always run `calculate_re()` on...

`change_tv()` should be able to add tv parameters when there are none

1

The Introduction vignette as written makes me think that `change_tv()` doesn't declare environmental linkages for parameters. It currently says https://github.com/ss3sim/ss3sim/blob/eeb0b33a7d30eca93c586a1724fa774e3f21fc44/vignettes/introduction.Rmd#L363 I would hope that this is done automatically, but I...

label old issues

5

## Problem New labels have been initiated and old issues are not using them. ## Proposal - [x] Add more labels - [ ] Go through all issues and add...

EM start year leads to different estimates

6

Estimates are slightly different depending on when the EM is started relative to the first year of catch. Typically, I don't think a stock assessment model would be started before...

Sampling updates

1

Integrate changes by @GwladysLambert into main package - [x] Fleets - [x] Sex - [ ] Selectivity shape - [ ] Ageing error - [ ] Sampling - [ ]...

This is a very minor pull request that only fixes three small typos that I found while reading the helpful vignette.