Esko Kautto

Crashing due to errors locking files

7

Running into some issues with the basecaller command. This occurs on multiple datasets, so I don't think it's anything run-specific (unless they're all corrupted in a similar way): ``` >...

Human genome assembly parameters

5

I'm trying to run an assembly of a human genome with ~30x coverage with Nanopore reads. We're primarily running r5.24xlarge instances on Amazon, which have 96 cores and 768Gb of...

mini_assemble empty target sequences error

3

Dear nanopore devs, I'm having issues getting mini_assemble to run on human (HG001/NA12978) data. I've successfully ran it on smaller assemblies before, but a ~30x human genome seems to be...