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Kleborate Tutorial contains wrong description about incomplete matches
Hello,
I noticed that the KlebNet-GSP Kleborate Tutorial
available under https://bit.ly/kleborate-workshop (btw: the link is not correctly set in the Kleborate README.md
, i.e. missing https://
in front of the link) contains a wrong description at the top of page 10.
This part describes the reporting of acquired AMR genes and states:
If the hit is less than 100% coverage, a ? is added to the result. E.g. TEM-15? indicates an inexact match at 100% coverage, and TEM-15*? indicates an inexact match at <100% coverage.
I think it would be correct if it would state:
If the hit is less than 100% coverage, a ? is added to the result. E.g. TEM-15* indicates an inexact match at 100% coverage, and TEM-15*? indicates an inexact match at <100% coverage.
Note the asterisk instead of the question mark.
But I suppose the better formulation is the one provided in the wiki:
If the hit is less than 100% coverage, a ? is added to the result E.g. TEM-15? indicates an incomplete match at 100% identity, and TEM-15*? indicates an incomplete match at <100% identity.
Best regards