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ggsurvplot does not plot every event
Hey everyone,
I was using a dataset of mine and realized ggsurvplot
was not plotting all of the events occurring. I tried with the lung
dataset and it happens as well.
I changed one of the events to occur at time 1100, which is not included in the default dataset. Only when I extend the limits of the plot does this event appear. Should the function plot based on "rounding" the time by excess (in this case, plotting up to 1200 or something)?
Expected behavior
Actual behavior
Steps to reproduce the problem
require("survival")
require(survminer)
df<-lung
df$status[6]<-2
df$time[6]<-1100
#View(df)
fit<- survfit(Surv(time, status) ~ sex, data = df)
f1<-ggsurvplot(fit, data = df)
f2<-ggsurvplot(fit, data = df,break.time.by=200,xlim=c(0,1100))
### `session_info()`
R version 4.3.2 (2023-10-31 ucrt)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows 11 x64 (build 22631)
Matrix products: default
locale:
[1] LC_COLLATE=Portuguese_Portugal.utf8 LC_CTYPE=Portuguese_Portugal.utf8
[3] LC_MONETARY=Portuguese_Portugal.utf8 LC_NUMERIC=C
[5] LC_TIME=Portuguese_Portugal.utf8
time zone: Europe/Lisbon
tzcode source: internal
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] survminer_0.4.9 ggpubr_0.6.0 ggplot2_3.4.4 survival_3.5-7
loaded via a namespace (and not attached):
[1] utf8_1.2.4 generics_0.1.3 tidyr_1.3.1
[4] rstatix_0.7.2 stringi_1.8.3 lattice_0.21-9
[7] digest_0.6.34 magrittr_2.0.3 evaluate_0.23
[10] grid_4.3.2 fastmap_1.1.1 plyr_1.8.9
[13] Matrix_1.6-5 backports_1.4.1 gridExtra_2.3
[16] purrr_1.0.2 fansi_1.0.6 scales_1.3.0
[19] abind_1.4-5 cli_3.6.2 KMsurv_0.1-5
[22] rlang_1.1.3 munsell_0.5.0 splines_4.3.2
[25] withr_3.0.0 yaml_2.3.8 tools_4.3.2
[28] reshape2_1.4.4 ggsignif_0.6.4 dplyr_1.1.4
[31] colorspace_2.1-0 km.ci_0.5-6 broom_1.0.5
[34] vctrs_0.6.5 R6_2.5.1 zoo_1.8-12
[37] lifecycle_1.0.4 stringr_1.5.1 car_3.1-2
[40] pkgconfig_2.0.3 pillar_1.9.0 gtable_0.3.4
[43] data.table_1.14.10 glue_1.7.0 Rcpp_1.0.12
[46] xfun_0.41 tibble_3.2.1 tidyselect_1.2.0
[49] rstudioapi_0.15.0 knitr_1.45 farver_2.1.1
[52] xtable_1.8-4 survMisc_0.5.6 htmltools_0.5.7
[55] labeling_0.4.3 rmarkdown_2.25 carData_3.0-5
[58] compiler_4.3.2