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rtracklayer: openssl dependency version is hardcoded

1

System: Mac OS Catalina with Homebrew How to reproduce: ``` $ brew install openssl # as of 20 Apr 2020, installs [email protected] $ R > BiocManager::install("rtracklayer") ``` Expectation: the package...

ScottNortonPhD

rorynolan

rorynolan

Hello, I am trying to create a mask collection of ranges that have low coverage. > m_low m_low MaskCollection of length 1 and width 220198 masks: maskedwidth maskedratio active 1...

AlejandraPanzera

Hi, I tried to download the OrgDB object sourced by fungidb through annotationhub. Somehow it failed. See the commands and error below ``` library("AnnotationHub") hub hub AnnotationHub with 46259 records...

cparsania

Throughout the code, you install packages using `biocLite`. However, the **BiocInstaller** package is deprecated as of Bioconductor 3.8 and will be removed in Bioconductor 3.9 ([see release notes](https://www.bioconductor.org/news/bioc_3_8_release/#deprecated-and-defunct-packages)). You should...

gillsignals

Hi Kasper, Your tutorials on Bioc have been outstanding. Thank you very much for your tremendous contributions to the online community of learners such as myself. It appears that in...

vivical

I apologise if this is not a suitable place to ask a question of this type but I could not find any answers on the Bioconductor forum, link to my...

chrisclarkson

> A general class, allowing for multiple data matrices, is an eSet depicted below. But, from the eSet documentation: > eSet is a virtual class, so instances cannot be created....

DarioS

particular -> particularly, last text paragraph thanks for the useful course!

stas-malavin