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Make "ensembl_gene_id" default option for all import functions.

Open itsyogeshd opened this issue 4 years ago • 2 comments

itsyogeshd avatar Dec 07 '20 19:12 itsyogeshd

Could you list the functions ?

SherryDong avatar Jan 11 '21 07:01 SherryDong

its db_preload() function also for get_IDtransfer() function, because of biomart update and older version of R, the function seems to fail with following error.

Error in UseMethod("filter_") : no applicable method for 'filter_' applied to an object of class "c('tbl_SQLiteConnection', 'tbl_dbi', 'tbl_sql', 'tbl_lazy', 'tbl')"

but this is solved via adding useCache = FALSE in getBM() function, may be we add this in the get_IDtransfer() function as well.

itsyogeshd avatar Feb 12 '21 16:02 itsyogeshd