Janneke van der Zwaan

Results 40 issues of Janneke van der Zwaan

In the gui, a 'file diff link is displayed regardless of whether there is a diff stored or not.

bug
gui

I like [click](http://click.pocoo.org/5/) to build command line tools. However, currently, it is incompatible with recipy. (Might also be a nice solution to build the recipy cli in.)

enhancement
sprint

Related to #48; possible solution is #104 (although it is not effortless)

enhancement
sprint

Because log_warning opens and closes the database, if a recipy method throws a warning (for example `get_version` in `recipyCommon/libraryversions.py`), the database is closed after logging the warning, which causes problems...

bug

In some sense, an IPython/Jupyter notebook is Recipy's biggest competition, although the problems addressed are slightly different. Related to #65.

enhancement
sprint

Can be added to the list of datasets. * MiBio - https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6197712/ - https://github.com/jie-mei/MiBio-OCR-dataset

Some of the primitives are language dependent and currently only work for English. I'd like to try nlp_primitives, but usually work with Dutch text. It would be nice to be...

cwldep is a tool that helps you to import tools and workflows from other sources for use in your own workflow. https://github.com/common-workflow-language/cwldep