SCALE
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jsxlei
Single-cell ATAC-seq analysis via Latent feature Extraction
Hello, I have been using your program to do imputation for some scATAC-seq data. I have a query regarding the output. The output for the both --binary and --impute function...
Hi! Thanks very much for this amazing tool. So far I have been having really good results with my data, but I would like to move forwards the tutorial you...
Dear SCALE team, I am currently trying to run SCALE, which has been successfully installed. However, it outputs the following error regarding version `CXXABI_1.3.8' not found by sklearn package (which...
Hi, It is just a naive idea. According to the paper, you describe that scATAC-seq has the issue of "missingness" like the dropout in scRNA-seq data. So what if using...
Dear author, I’m writing to you because I have some confusions when I try to recurrent the results using the forebrain data.I used the forebrain data (Downloaded at https://cloud.tsinghua.edu.cn/d/eb4371c556bc46ef8516/?p=%2FForebrain&mode=list),and the...
Hello, I've try your SCALE tools.I want to know how you can control the CPU usage.
I was able to install all the dependencies correctly and running the command as SCALE.py --help works fine. I am using python 3.7.3 and Ubuntu 18.04.3. I am trying to...
Hi, I encountered the following error when running SCALE. I have checked my data matrix. The maximum value is 35, the minimum is 0 and there is no na value....
Hello, I've try your SCALE tools, but always encountered with error message "Segmentation fault (core dumped)", even just using "SCALE.py --help". I'm working on "CentOS release 6.9 (Final)" and "Python...
