J. Sebastian Paez

Hey there! IMO linux and mac don't really need an installer, distributing the executable has been good enough in my experience. I am fixing the actions to allow t his...

https://github.com/jspaezp/mokapot/actions/runs/6710019031/job/18234321059 My local branch fails due to a relative import ... I think we might need to modify that.

https://github.com/wfondrie/mokapot/pull/119

[Full disclosure, I love pydantic and use it for json validation all the time] In principle I really like this idea! Although I am not sure exactly where and how...

thanks for the context! Just for the record the dagster reference was more regarding the interface than the actual implemeting package. I would love to go more into detail regarding...

+1

I will have this in the back burner until we close https://github.com/DanielNoord/pydocstringformatter/issues/169 I think it would give better tooling to design the formatter

Hey @lazear! Along these lines ... I worked on a prototype to use IMS predictions during the prediction stage (branch diffs: https://github.com/lazear/sage/compare/master...jspaezp:sage:feature/ims_model), and even though the model gives very modest...

@tomthun not quite yet! There is a pretty good discussion here >> https://github.com/lazear/sage/pull/98

1. I am not sure! I know that for some MS3-TMT experiments the precursor is sometimes from multiple MS2 peaks and therefore the MS3 will have multiple precursors annotated (but...