Jose Sergio Hleap

HHPRED databases should be an environmental variable by default

1

Hi, I work in a HPC platform where where users do not have write access the globally installed software stack. As hh-suite is right now, users cannot set the databases...

Google cloud

5

Hi! this is quite a clever pythonic and readable workflow manager! thank you for it. If I understand correctly, your cloud support is limited to AWS (AWS Batch, AWS Glue)....

Memory limits for local executor

3

I have noticed that redun seems to reserve memory even in local executors. Is there a way to tune that? or I am wrong on this assumption?

Allowing cpus to be set annd used in run_alphafold.py

6

Change requirements so that TF is both cpu and gpu enabled Set a default for use_gpu_relax that would not fail in the run (False in this case) Adding cpu in...

Too many threads spawed in DANCo().fit()

3

Hello, I am an HPC technichal consultant and one of our users is using your package. The function `skdim.id.DANCo().fit(data)` seems to be spawning a significant number of threads with no...

Hello! I would like to use your suite in an IBM Power 9 little endian cluster. Would it be possible to get a binary for ppc64le or the source code...