Julianus Pfeuffer
Julianus Pfeuffer
Feel free to open a PR with the environment update
We need a "assets/schema_input.json"
I think the nfcore/proteomicdslfq container was not uptodate. Can you do `docker pull nfcore/proteomicslfq:dev` and try again?
Hi! Can you also upload the log of the job? You will find it in the corresponding hashed workspace folder. /mnt/d/nf-core/proteomicslfq/work/a9/b7aee795829399904f455ea0ba106a
That looks bad. Unfortunately it is the underlying tool that crashes. You might need to file a report with the inputs to the developers.
Does the test data work for you?
By the way, why do you add two file endings to your database? This is a big source for possible errors.
You actually have to *de*crease max memory that the jobs are allowed to request. Apparently nextflow thinks you only have 62.7GB of RAM available. You might be able to get...
Hi! And thank you ;) It is unfortunate, that it did not work out-of-the-box although we tried hard to design it like that. However, your specific problem sounds more like...
@timosachsenberg thoughts?