Joshua Orvis

I use GFF3 as the primary export format for hundreds of prokaryotic and eukaryotic genomes and, while the structure is generally well defined in the specification for coding genes, it...

MDI icon library page failing to load

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### Before You Begin - [X] I have cleared the cache of my browser. - [X] I have tried a different browser to see if it is related to my...

ERROR:parser:File taxadb/nucl_gb.accession2taxid.gz does not exist

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Using the latest version (on Ubuntu, installed from pip3) and I get an error: ``` jorvis@ref-db-build:/dbs$ taxadb download -o taxadb --type taxa INFO:taxadb.download:Downloading taxdump.tar.gz 95%|████████████████████████████████████████████████████████████████████████████▎ | 49.1k/51.4k [00:00

First attempt to run test job fails

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I'm going to try looking into this, but in the meantime though I'd report it. Here's the output from my test run after following the documentation. $ nextflow run companion...