Jonathan Fischer

icon indicating a website link jonathanfischer97.github.io icon indicating an email [email protected]

icon company Margaret Johnson Lab, Johns Hopkins University icon location Baltimore, MD icon location PhD student. Computational biophysics, simulation, biochemical oscillators, Julia

Results 12 issues of Jonathan Fischer

`EnsembleSummary` plot recipe doesn't respect `idxs` kwarg

8 comment

# Problem - When plotting with: ```julia ensemble_summary = EnsembleSummary(sim) plot(ensemble_summary; idxs = 1) ``` the resulting plot includes all state variables rather than just the first. - Doesn't work...

bug

`remake` doesn't deep copy; mutating new `MTKParameters` affects parent problem as well

2 comment

## `remake` doesn't copy the `MTKParameters` object, unless new parameters are passed directly - If a new problem is made with `newprob = remake(odeprob)`, any mutations to `newprob.p` will affect...

bug