Circleator
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Add walkthroughs/tutorials for basic use-cases.
Add walkthroughs/tutorials for basic use-cases to the documentation. The resulting images can also be added to the gallery.
From the manuscript:
- visualizing the gene annotation and DNA sequence data from a GenBank flat file e.g., for a finished or draft bacterial genome
- investigating patterns of gene conservation in two or more closely-related strains or serovars
- showing SNPS and indels in several microbial strains relative to a reference genome and reference gene set
- viewing coverage plots of RNA-Seq data from multiple transcriptomic samples aligned to one or more prokaryotic or eukaryotic genomes
A comprehensive GenBank flat file visualization tutorial has been added:
http://jonathancrabtree.github.io/Circleator/tutorials/gb_annotation.html
Four done, only one (graphs and heat maps) left.