EnrichedHeatmap
EnrichedHeatmap copied to clipboard
strange plot Enrichedheatmap
HI, I was trying to plot my enriched heatmap using a normalized matrix. Unfortunately, when I try to plot it, I can see only half of the heatmap plotted. Could you help me to see where the error comes from?
library(EnrichedHeatmap)
str(c)
num [1:2388, 1:2001] 1 0 0 0 0 0 0 0 0 0 ...
mat_kod8= as.normalizedMatrix(c, k_upstream = 1001, k_downstream = 1000, k_target = 0, extend = 1000, smooth = TRUE, keep = c(0, 0.95))
dim(mat_kod8)
#[1] 2388 2001
EnrichedHeatmap(mat_kod8, name = "fragment ko", column_title = "Enrichment KO_d8", use_raster= T)