To-do-list 2022-02-03

[jokergoo]

• [ ] Check anno_mark() or maybe other functions which reply on absolute size of the device on Jupyter book #837
• [x] Speed up Heatmap() #832
• [ ] Bivariate color scale and legend #839 #812
• [ ] automatically generate legends for more annotations #846
• [ ] anon_block(): draw s subset of blocks #848
• [x] set a proper ylim when all the values are identical #800
• [x] add anno_textbox() #847
• [ ] add title for annotations #879
• [ ] anno_link(): one-to-many, many-to-one, many-to-many #890
• [ ] discrete color mapping for continuous values #880
• [x] if rect_gp = gpar(type = "none"), then show_heatmap_legend = F #885
• [ ] rasterization generates blurry plot for large matrix? #887
• [x] automatically recognize global variables in cell_fun and layer_fun #892
• [ ] size limit on 'grid_width' for the legend #896
• [ ] anno_block() with anno_mark() #905
• [ ] Automatically generate legends for anno_customize()? #916
• [ ] support raster annotation graphics #907
• [x] merge several anno_density into one #919
• [ ] Missing data in oncoPrint #931
• [ ] UpSet for Genomic Regions, I want to show number of regions, but not the total number of base pairs #914
• [ ] oncoPrint: cluster_columns = FALSE #908
• [ ] merge several anno_density into one #919
• [ ] when snpc is set for both width and height, legend is always align to the right of the plot #917
• [ ] white lines appears again in raster images
• [ ] [enhancement] texture and flexible annotation legend placing #939
• [ ] Heatmap with pre-defined dendrogram, margin ordering #949
• [ ] support phylo object #305
• [ ] adjust legend order #557
• [ ] nested split #1051
• [ ] when row_split is set, row_title can be a named vector. #1092
• [ ] use bezier curve for anno_mark and anno_link.