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problems installing Tb-profiler using conda with MacOS

Open Leobpfbac opened this issue 1 year ago • 6 comments

Before start the installation, conda was activated and then I configured the channels: conda config --add channels defaults conda config --add channels bioconda conda config --add channels conda-forge

After that I tried to install Tb-profiler using conda and mamba at my laptop with MacOS. I receive this message: "Could not solve for environment specs Encountered problems while solving:

  • nothing provides minimap2 needed by pathogen-profiler-0.1-py_0 The environment can't be solved, aborting the operation"

Then I tried to install minimap2 using conda: conda install minimap2 (base) Collecting package metadata (current_repodata.json): done Solving environment: failed with initial frozen solve. Retrying with flexible solve. Collecting package metadata (repodata.json): done Solving environment: failed with initial frozen solve. Retrying with flexible solve. PackagesNotFoundError: The following packages are not available from current channels:

  • minimap2

What should I do?

Leobpfbac avatar Jan 26 '23 20:01 Leobpfbac