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Published 20 hours ago • verified publisher icon jni

Feature request: add napari plugin

Open jni opened this issue 3 years ago • 5 comments

We should be able to create a plugin built into skan that returns a Labels layer with the path_ids as values and the summary properties as properties.

Other functionality such as pruning and orienting could also be added.

jni avatar May 03 '21 09:05 jni

FYI: https://github.com/haesleinhuepf/napari-skeleton-analysis

haesleinhuepf avatar Jul 22 '22 20:07 haesleinhuepf

@haesleinhuepf I get a 404 — maybe you forgot to make it public? Also there is https://github.com/kevinyamauchi/napari-skeleton-curator, sorry that there wasn't a link here.

jni avatar Jul 23 '22 07:07 jni

maybe you forgot to make it public?

Yes :D I'm still a beginner obviously.

Also there is https://github.com/kevinyamauchi/napari-skeleton-curator, sorry that there wasn't a link here.

Super cool, because I don't think there's too much overlap between these two plugins. Thanks for the link! 🙌

I've just added this section to the readme to improve the linking between the plugins. https://github.com/haesleinhuepf/napari-skeleton-analysis#related-plugins

haesleinhuepf avatar Jul 23 '22 10:07 haesleinhuepf

Ok. Fyi the plan with skeleton curator was to fold its functionality into skan. How would you feel about me doing the same with yours? I'm still fiddling with the final API then I'll get to work on pluginifying all the things. 😜

jni avatar Jul 23 '22 14:07 jni

How would you feel about me doing the same with yours?

How about I send you a PR? 🙃 I'd be happy to. Let me when it's the right time ⏰

haesleinhuepf avatar Jul 23 '22 15:07 haesleinhuepf