Jitendra Narayan

icon indicating a website link https://bioinformaticsonline.com/profile/admin icon indicating an email [email protected]

icon company BOL icon location India icon location Within the broad domain of bioinformatics, I mainly focus on comparative genomics, genome assembly, chromosomal rearrangement/breakpoint and evolution.

Results 4 issues of Jitendra Narayan

Choords not visible !

1 comment

"GRCh37.json" and "fusion-genes.csv" files are located inside the same folder. Unfortunately, it does not display anything in browser(chrome/firefox). Did I miss something ? ``` var circos = new Circos({ container:...

Ploidy estimation wrong !

4 comment

Estimate ploidy wrongly ! I expected it to be 2 ... ``` ➜ MASURCA_all ./assemble.sh [Fr Okt 19 15:27:18 CEST 2018] Processing pe library reads [Fr Okt 19 15:38:33 CEST...

Reads count decrease after porechop!

1 comment

Despite of splitting 1,202 / 1,634,477 reads from the middle, and reads count is less after chopping. Did I do anything wrong ? ``` porechop -i /media/urbe/MyDDrive/ONTdata/allONT/allONT.fasta -t 40 >...

RuntimeError: maximum recursion depth exceeded !

1 comment

The script terminated with an error message: ... return self._populate_scaffold(links, end, sid, scaffold, orientations, gaps, orientation) File "./pyScaf.py", line 307, in _populate_scaffold return self._populate_scaffold(links, end, sid, scaffold, orientations, gaps, orientation)...