heightDist does not work

[h20gg702]

Hi, I faced a problem that heightDist does not work when I used the following script. Do you know the solution? Thank you. A <- new('track', dat=DMR_gr, type='gene', name='DMR_anno') B <- new('track', dat=features, dat2=pop, type='gene', name='B') C2 <- importScore(file.path(bw.files1[1]), format="BigWig", ranges=gr) C1 <- importScore(file.path(bw.files4[1]), format="BigWig", ranges=gr) C2$dat2 <- C1$dat optSty <- optimizeStyle(trackList(A,B,C, heightDist = c(0.1, 1, 0.25)), theme="col") trackList <- optSty$tracks viewerStyle <- optSty$style vp <- viewTracks(trackList(A,B, C), gr=gr, viewerStyle=viewerStyle, operator="+")

[h20gg702]

Hi, I faced a problem that heightDist does not work when I used the following script. Do you know the solution? Thank you. A <- new('track', dat=DMR_gr, type='gene', name='DMR_anno') B <- new('track', dat=features, dat2=pop, type='gene', name='B') C2 <- importScore(file.path(bw.files1[1]), format="BigWig", ranges=gr) C1 <- importScore(file.path(bw.files4[1]), format="BigWig", ranges=gr) C2$dat2 <- C1$dat optSty <- optimizeStyle(trackList(A,B,C, heightDist = c(0.1, 1, 0.25)), theme="col") trackList <- optSty$tracks viewerStyle <- optSty$style vp <- viewTracks(trackList(A,B, C), gr=gr, viewerStyle=viewerStyle, operator="+")

Hi, I solved by vp <- viewTracks(trackList(A,B, C,, heightDist = c(0.1, 1, 0.25))), gr=gr, viewerStyle=viewerStyle, operator="+"), but my figures lacks y-axis number...

[jianhong]

Nice to know you figured out it by yourself. You may want to check the documentation here first. If you still have trouble in get the y-axis please let me know.

[jianhong]

Maybe I should add the documentation like this: setTrackYaxisParam(trackList[[2]], 'label', TRUE)

[h20gg702]

Thanks. It works well!