taxtriage icon indicating copy to clipboard operation
taxtriage copied to clipboard

Returned top hits from distributions against expected is too large

Open Merritt-Brian opened this issue 5 months ago • 0 comments

Description of the bug

Due to many metagenomic organisms not being found in HHS, a zscore of -1 (never present) dramatically increases reference size. For now, disable the -1 and only consider seen organisms outside the expected bounds (>=0 zscore)

https://github.com/jhuapl-bio/taxtriage/blob/main/bin/get_top_hits.py#L366

Command used and terminal output

No response

Relevant files

No response

System information

No response

Merritt-Brian avatar Sep 21 '24 14:09 Merritt-Brian