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Maximum Likelihood Amplicon Pipeline

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Dear author team, This is a marvelous work! I can try the test data on my personal computer locally, but now I need to run meta-analysis on the linux server....

RFAM is now blocking direct download to the 16S SSU covariance matrix, causing the refpkg workflow to fail.

Here's an example of how we could configure the individual components of maliampi in the BASH Workbench. I just did this for refpackage.nf, but I thought this would be a...