Jessica Gadling

`flag_value` is passed through `ParamType.convert`

4

In upgrading from click 7.1.2 to 8.0.1, our click-based CLI started failing with type errors. We have click options whose default values are classes, and as of 8.0.1 they're being...

Fill in more lat/long data from the OpenStreetMap name-to-location API

2

## Increase coverage for default location to latlong mapping After running all GISAID samples through ncov's location translation pipeline, our system tries associate a lat/long with each location in the...

Support mounting docker volumes in worker containers

2

Miniwdl (depending on settings) currently mounts a variety of files/directories in its `--dir` directory into its task containers. The current implementation assumes either: - Miniwdl isn't being run from inside...

Hacky proof-of-concept for supporting reverse-index-sorts. Use ^= operator to flip the results order, works for IN queries as well.

Since mysql doesn't support reverse indexes, being able to control whether the results returned by HandlerSocket are returned in ascending/descending order would be a huge improvement to its usability. Right...