Joseph Fass

Include leader sequences in assembly?

1

In my application I have need downstream of the "full" TCR sequence, including leader all the way to the constant region. Is it conceivable to alter the references (pad out...

make clean required for 0.2

1

After struggling seeing other people's paths in MUMmer files (/Home/mmoser/... etc.), I realized I needed to do a 'make clean' in the MUMmer directory. Should that be added to the...

When fastqsanger reads were trimmed with fastqillumina specified, the output was only one sequence - a file with four lines. Now, this was behavior of an older scythe version _on...

With PE reads, both reads should have adapter sequence starting at the same exact position (barring rare indel errors). Scythe should check both reads at the same time to make...