Dr. Jens Preußner

Hi Jean, thanks a lot for the hints! I will work on this and let you know if its usable. Best, Jens

I just saw the row.order argument to c.view.pathways. This seems to solve the problem.

Hi! I would highly appreciate Carls suggestion. It used to work with environmental variables before (somewhat 10 months ago), but now it seems to default to `us-east-1` in case `AWS_DEFAULT_REGION`...

Thanks a lot, Hanna, for your helpful elaboration on my proposed approach. Your correlation-based approach sounds very straight-forward and might be more suitable for what I'm after. I will give...

I investigated a bit and have an example to reproduce the error. It has nothing to do with barcodes in headers primarily, but with handling of unmatched barcodes in case...

Hi Joe, do you think you'll be able to fix the bug in the next few weeks? 😃 Best, Jens

Uh, that's bad news, but understandable. I haven't programmed C++ in a while, but I will try to have a look and dig around if you don't mind.

Hi! We're a small bioinformatics service group at a Max Planck Institute in Germany and typically receive a lot of requests to provide access to public data sets from single-cell...

@signechambers1, a typical task for our cellxgene users (mostly biologists, some medical doctors) is exploration of differences in cellular subsets. They might want to answer a disease-related question or explore...

We would also be highly interested in this feature. Sometimes datasets on GEO follow exactly the pattern Alex described earlier. The small improvement on scanpy's side would allow us to...