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differences in report from kraken2 and make_kreport.py

Open moxgreen opened this issue 1 year ago • 0 comments

I obtained the output file and report file from a kraken2 run.

Then I re-generated the report starting from the output running make_kreport.py.

I found differences in the column 4 (rank code) in the two version of the report. E.g.

original report 2.02 160013 0 K2 33213 Bilateria re-generated report
2.02 160013 0 D4 33213 Bilateria

Is this expected?

I'm using the master version of Krakentools (commit d4a2fbe2833c2392a724697c0c97a3014e748474) and Kraken version 2.1.3

moxgreen avatar Feb 13 '24 16:02 moxgreen