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Published 20 hours ago • verified publisher icon jenniferlu717

extract reads error

Open senukobla opened this issue 2 years ago • 1 comments

Hi, I am trying to use the extract read tool to select out some reads but I am getting this error "ValueError: invalid literal for int() with base 10: 'taxonomy_lvl " . Do you have any suggestions on how to fix . Thanks in advance.

senukobla avatar Oct 11 '22 03:10 senukobla

Can you send me the full error message? and the header for the output report you're using.

Are you using KrakenUniq? Also, are you using the most recent script?

jenniferlu717 avatar Oct 11 '22 18:10 jenniferlu717