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Provide some tests

Open vhaasteren opened this issue 8 years ago • 2 comments

Provide some simple tests for the sampler

vhaasteren avatar Mar 29 '16 18:03 vhaasteren

The examples folder now contains a "gaussian_likelihood" and a "curved_likelihood" jupyter notebook. The Gaussian likelihood also contains a simple transformation class that transforms away an interval for usage with Hamiltonian samplers.

Questions:

  • what other examples do we need?
  • do we want to incorporate the interval transform as functionality inside of the PTMCMC package somewhere? Perhaps as a module? It is a very general thing.

vhaasteren avatar Apr 01 '16 21:04 vhaasteren

Finally added a simple example for an N-D gaussian without using the hamiltonian sampling. This also shows how to add custom jump proposals. We still may want a parallel tempering example

jellis18 avatar Aug 24 '16 14:08 jellis18