wfalm
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Refinements of the WFA alignment algorithm with better complexity
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Would you be able to share the data (ONT reads and assembly contigs) you used in your paper, or a script used to generate it? I'd like to test my...
The section on the speedup to `O(n+m+s^2)` should have a remark on whether you are assuming a finite or infinite alphabet. Implicitly in the context of pairwise alignment, I would...