parasail
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semi-global `parasail_sg_dx` not reporting `beg_ref` correctly
Example query GAAT
and database/target AGAATA
. The returned cigar via parasail_result_get_cigar
is beg_query=0
, beg_ref=0
. The ends are fine (from the result) end_query=3
, and end_ref=4
. I would expect the following alignment:
q: GAAT
||||
t: AGAATA
so I think the beg_ref
should be 1
not 0
. I am using v2.6.