jayypaul
jayypaul
Error message when doing: plot_vs_ttest() It seems my DE didn't work because these commands yield the following results: print(testReal.pval[:10]) print(testReal.qval[:10]) print(testReal.summary().iloc[:10,:]) [ 0. 0. 0. 0. 0. nan 0. nan...
/Users/cahanlab/anaconda3/envs/pyEnv2/lib/python3.6/site-packages/numba/object_mode_passes.py:188: NumbaDeprecationWarning: Fall-back from the nopython compilation path to the object mode compilation path has been detected, this is deprecated behaviour. For more information visit http://numba.pydata.org/numba-doc/latest/reference/deprecation.html#deprecation-of-object-mode-fall-back-behaviour-when-using-jit File "../../../../anaconda3/envs/pyEnv2/lib/python3.6/site-packages/mnnpy/utils.py", line 107:...
These two samples should integrate highly but they unfortunately don't. Keep getting NumbaPendingDeprecationWarnings when I try to run mnn_correct.. : Fall-back from the nopython compilation path to the object mode...
Hello, I have a heterogeneous dataset consisting of stroma and immune cells. For now, I'm interested in the stroma cells, and I was wondering if running scran again after subsetting...