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Published 20 hours ago • verified publisher icon jandrewrfarrell
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RUFUS k-mer based genomic variant detection

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Documentation for RUFUS output

Hi Andrew, As discussed at GI2018, It would be better if you just add documentation for understanding the output. Additionally it would be better to add all "KEYS: like "PLC5,LCH8"...

snashraf avatar snashraf

Kmer required

We need to sanitize our inputs better. For example, if -k is not provided RUFUS just runs and crashes with an odd message. We should check that -k was provided...

jandrewrfarrell avatar jandrewrfarrell

manual

6 comment

Hello, I am keen on trying this tool on our data! I already have kmers calculated by Jellyfish. However, I am not sure how to proceed further. Can you please...

galapah avatar galapah

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RUFUS k-mer based genomic variant detection

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