How filter scripts work?

[hansiu]

Could you please explain how the scripts in pyVCF/scripts work? (How to filter with those filters, how to make a new filter, anything really). Documentation and Docs@http://pyvcf.readthedocs.io/en/latest/API.html do not help.

(I'm asking because with a college group we are trying to incorporate a VCF tool based on pyVCF into biopython as a project for a class)

(@Zojka probably has more questions)

[jamescasbon]

How far did you get with: http://pyvcf.readthedocs.io/en/latest/FILTERS.html

On 12 December 2016 at 11:54, Hania Kranas [email protected] wrote:

Could you please explain how the scripts in pyVCF/scripts work? (How to filter with those filters, how to make a new filter, anything really). Documentation and Docs@http://pyvcf.readthedocs.io/en/latest/API.html do not help.

(I'm asking because with a college group we are trying to incorporate a VCF tool based on pyVCF into biopython as a project for a class)

(@Zojka https://github.com/Zojka probably has more questions)

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