BITFAM taking way too much time

[Sophon-0]

Hello, I was running BITFAM on a subset of 200 cells: BITFAM_res <- BITFAM(data = data_matrix_normalized, species = "human", scATAC_obj = NA, ncores = parallel::detectCores() ) And it would not finish even in 3 days. I have 128GB RAM and 32 CPUs. Thanks !

[sgao30]

Hi,

Thank you for trying our tools and your feedback!

It is really weird to run such long time on a small dataset. Could you please provide more information? Like at which step it stuck?

Best, Shang