effect plots and partial residuals for lme4 models with 2 random slope terms and quadratic term
Is there any possibity to use the effect plot with the partial residual function also for a model involving 2 random slope terms? It works brilliant for models with one random slpoe term, but not with 2. Just asking, as I might just have not fully understood the underlying problem. Additionally also it does not seem to work when including a polynomial predictor term (poly(variable, 2, raw = TRUE)), any ideas how this could work?
Cheers!
Hi, I'm having trouble replicating the issue.
Here's what I'm doing, so maybe I'm just misunderstanding some aspect of your problem.
library(ggplot2)
library(jtools)
lfit_poly <- lmer(cty ~ poly(displ, 2) + year + cyl + class + fl + drv + (drv + year | manufacturer), data = mpg)
effect_plot(lfit_poly, displ, partial.residuals = T)
Now I can get an error when I use poly(x, 2, raw = TRUE). I'm not sure why this is but it will be a low priority for now since I know the raw = FALSE version works.