Jennifer A Clark

@richardjgowers any thoughts on this? I think this is a glaring issue in MDAnalysis, although it seems that an analysis that relies on capped_distances won't be affected as long as...

The error is: testsuite/MDAnalysisTests/datafiles.py:288:89: E501 line too long (89 > 88 characters) [flake8] This line isn't part of this contribution, but should I fix it anyway?

Really don't worry about it, I downgraded this PR to a draft to look into use of cython. I have three other PRs that are closer to being done and...

@hmacdope, it's ready to go here and I'm open to moving forward with it. However, isn't it the main developers' preference that it be incorporated into an MDAkit?

That's fine. I did take a quick look at that and it's rougher than I thought. The existing MSD functionality isn't there yet. Is there a plan to have the...

To compile the docs, pyyaml > 3.01, should be added to installation of the package.