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polish a region

Open woodoo46 opened this issue 6 years ago • 1 comments

Hi,

Just want to know if we can polish certain region? For example, we have mapped reads on whole human genome, however, we only want to polish certain regions say 1:1000000-2000000, is this possible?

Thanks.

George

woodoo46 avatar Aug 07 '19 12:08 woodoo46

Hi George, unfortunately Racon does not have this option. You could extract the region from the FASTA file, map your reads to it and then employ Racon.

Best regards, Robert

rvaser avatar Aug 07 '19 13:08 rvaser