PyPathway

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Hi, I am using the ora package to perform Reactome and KEGG analyses. I have gene symbols so I used IdMapping to convert them to entrezid. From the conversion I...

charliexbrown

Allow installing into an empty virtualenv

1

This moves the import of numpy into a custom build_ext command so we can: * postpone the import of numpy to a time where setuptools has had a chance to...

ecederstrand

Cannot install in a clean virtualenv

1

A Python package should always be able to install itself in an empty virtualenv and handle dependencies automatically. Trying to do this with PyPathway fails: ```bash $ git clone https://github.com/iseekwonderful/PyPathway.git...

ecederstrand

Hey, I just had a quick question about the SPIA implementation. I noticed that in the tutorial you posted, the p-values for the Colorectal dataset seem to be quite different...

jadeshi