Sam Isaacson

I think that would need to be its own package. SDPD simulations are much more molecular-dynamics in how they work, with all the optimizations that typically are used there. The...

You'll notice that they use the LAMPS MD package for much of the functionality in that paper...

Thanks! Yes, my plan, which hopefully I can get to this weekend or next week was to split the big tutorial into several pieces and clean them up. Something along...

I don't think docstrings should be in the tutorials -- see the Catalyst style. I'd prefer the tutorials to introduce how to use DiffEqJump in the most common use cases,...

@00krishna if you want to take a first pass the simplest thing to do would be to initially split the tutorial in two parts, and have the second start with...

TODO still: - [x] convert everything to `@example` blocks - [ ] add strict mode - [x] split the tutorials - [x] get all the API references in - [...

I'm not sure what you mean? The tutorial starts with Catalyst, but everything after it is pure DiffEqJump. Also, most of the core functions have docstrings showing now at https://jump.sciml.ai/dev/api/

But maybe I should update that tutorial to move the Catalyst stuff to the end. Then it can start with DiffEqJump but present Catalyst at the end for people that...

Yeah, I think it makes sense to reverse the order. i.e. show SIR in DiffEqJump first, and then at the end point out it is easier to do these types...

I don't think putting the parameters after is really needed, and maybe it is a bit confusing (since the earlier declaration makes clear the parameters are beta and nu, which...