Sam Isaacson
Sam Isaacson
This probably makes more sense to ask about at [Weave.jl](https://github.com/JunoLab/Weave.jl). If they added support to convert Weave .jmd notebooks to Pluto notebooks it would be trivial to add such support...
These should probably just be removed; the first two tutorials are basically covered in Catalyst doc tutorials, as is a basic example of bifurcations with BifurcationKit. The steady-state calculations via...
It would be nice if we could easily sync the Catalyst doc tutorials into Weave ones here somehow to allow a Notebook version. @ChrisRackauckas is there any tooling for syncing...
I guess we could convert the Catalyst tutorials to Weave markdown ones here, and then just link to them in the Catalyst docs.
I'd argue that this is the last major functionality that is needed to offer many biology modelers a complete package for their day to day use. Having 1. Parameterization methods...
Yes, I totally agree about tau-leaping. Completely forgot about it. Ultimately it would be great to reach a point where we can resolve different reactions (or species?) among ODEs, SDEs,...
That seems really weird. As an alternative, what info do you want to calculate or need from the macro that you can’t currently get at? We could always save more...
From @TorkelE on Slack, to recover the steady-state support we had we can do ```julia using ModelingToolkit import HomotopyContinuation const HC = HomotopyContinuation # Define a MT nonlinear system @variables...
I thought the resolution of the other issue is that this is better handled in SBML through generating rate constants within the ReactionSystem that are scaled appropriately by the volumes...
So are you just looking for a place to store information like symbols for `(compartment,volume)`?